Biomolecules

Complete Master Class & Mind Map by Shoorveer Notes
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I. Carbohydrates

Classification

  • Monosaccharides: Simplest carbs, cannot be hydrolyzed further. (e.g., Glucose, Fructose, Ribose).
  • Oligosaccharides: Yield 2-10 monosaccharide units on hydrolysis. Includes Disaccharides (Sucrose, Maltose, Lactose).
  • Polysaccharides: Yield large number of monosaccharide units. (e.g., Starch, Cellulose, Glycogen).
  • Reducing Sugars: Reduce Fehling's & Tollens' reagent (All monosaccharides, Maltose, Lactose).
  • Non-Reducing Sugars: Do not reduce (e.g., Sucrose - due to glycosidic bond involving both anomeric carbons).

Preparation of Glucose

  • From Sucrose (Cane Sugar): Boiled with dilute HCl/H2SO4 in alcoholic solution.
    C12H22O11 + H2O → C6H12O6 (Glucose) + C6H12O6 (Fructose)
  • From Starch: Commercial method. Hydrolysis of starch by boiling with dil. H2SO4 at 393 K under pressure.
    (C6H10O5)n + nH2O → nC6H12O6 (Glucose)

Mega Reactions of Glucose (V.V.I.)

1. Reaction with HI & Red P
Glucose + HI (heat) → n-Hexane
(Proves straight chain of 6 carbon atoms)
2. Reaction with Hydroxylamine (NH2OH)
Glucose + NH2OH → Glucose Oxime
(Confirms presence of Carbonyl group)
3. Reaction with HCN
Glucose + HCN → Glucose Cyanohydrin
(Confirms Carbonyl group)
4. Oxidation with Mild Agent (Br2 Water)
Glucose + Br2 Water → Gluconic Acid
(Confirms presence of Aldehyde group)
5. Oxidation with Strong Agent (HNO3)
Glucose + HNO3 → Saccharic Acid (Glucaric acid)
(Confirms presence of primary alcoholic group)
6. Acetylation with Acetic Anhydride
Glucose + (CH3CO)2O → Glucose Pentaacetate
(Confirms presence of 5 -OH groups)
7. Osazone Formation (Extra Content)
Glucose + 3 Phenylhydrazine → Glucosazone
(Important for identifying sugars. Fructose also forms same osazone)
8. Ruff Degradation (Extra Content)
Aldohexose → Aldopentose (Step-down reaction)
(Oxidation followed by decarboxylation)

Disaccharides linkages

  • Sucrose: α-D-glucose (C1) and β-D-fructose (C2). Invert sugar (Optical rotation changes from D to L on hydrolysis).
  • Maltose: α-D-glucose (C1) and α-D-glucose (C4).
  • Lactose: β-D-galactose (C1) and β-D-glucose (C4). Present in milk.

Polysaccharides

  • Starch: Plants store food. Two components:
    - Amylose: Water soluble, unbranched (C1-C4 α-glycosidic).
    - Amylopectin: Insoluble, branched (C1-C4 and C1-C6).
  • Cellulose: Cell wall of plants. Polymer of β-D-glucose (C1-C4 linkage).
  • Glycogen: Animal starch. Similar to amylopectin but more branched.

Cyclic Structures

  • Pyranose: 6-membered ring containing oxygen (Glucose).
  • Furanose: 5-membered ring containing oxygen (Fructose).
  • Anomers: Isomers differing at C1 configuration (α & β forms).
  • Mutarotation: Spontaneous change in specific rotation of an optically active compound in solution.

II. Proteins

Amino Acids & Classification

Polymers of α-amino acids. Contain -NH2 and -COOH groups.

  • Neutral: Equal NH2 & COOH (e.g., Glycine, Alanine).
  • Acidic: More COOH > NH2 (e.g., Aspartic acid).
  • Basic: More NH2 > COOH (e.g., Lysine, Arginine).
  • Essential: Cannot be synthesized in body, required in diet (e.g., Valine, Leucine).
  • Non-Essential: Synthesized in body (e.g., Glycine).
Zwitter Ion & Isoelectric Point
Amino acids in aqueous solution form dipolar ions (Zwitterion). The pH at which it does not migrate in an electric field is the Isoelectric point.

Structure of Proteins

  • Primary: Sequence of amino acids linked by peptide bonds (CONH).
  • Secondary: Folding of chain.
    - α-Helix: H-bonding between C=O and N-H of different residues.
    - β-Pleated sheet: Chains laid side by side.
  • Tertiary: Overall 3D folding (Fibrous & Globular shapes). Stabilized by H-bonds, disulfide, van der Waals, electrostatic forces.
  • Quaternary: Spatial arrangement of multiple sub-units.
  • Denaturation: Loss of biological activity due to change in physical (temp) or chemical (pH) conditions. Secondary/Tertiary structure destroyed, Primary remains intact.

III. Nucleic Acids, Vitamins, Hormones & Enzymes

Nucleic Acids (DNA & RNA)

Feature DNA RNA
Sugar β-D-2-deoxyribose β-D-ribose
Bases A, G, C, T A, G, C, U
Structure Double stranded helix Single stranded
  • Nucleoside: Base + Sugar (at 1' position).
  • Nucleotide: Base + Sugar + Phosphoric acid (at 5' position).
  • Phosphodiester linkage connects nucleotides.

Vitamins

  • Fat Soluble: A, D, E, K (Stored in liver/adipose tissue).
  • Water Soluble: B group, C (Must be supplied regularly, excreted in urine). Note: B12 is water soluble but stored in body.
  • Deficiencies:
    - Vit A: Night blindness.
    - Vit B1: Beri-Beri.
    - Vit C: Scurvy.
    - Vit D: Rickets.

Enzymes

  • Biocatalysts, highly specific globular proteins.
  • Reduce activation energy of reactions.
  • Work via Lock & Key mechanism or Induced Fit model.
  • Affected by temp, pH, and inhibitors.

Hormones

  • Chemical messengers secreted by ductless (endocrine) glands.
  • Steroids: Testosterone, Estrogen, Androgens.
  • Protein/Polypeptide: Insulin, Glucagon, Oxytocin.
  • Amines: Thyroxine, Adrenaline.

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